Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Gm21956-201ENSMUST00000179946 522 ntBASIC10.88□□□□□ -0.67
Hbb-b1P02088 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.88□□□□□ -0.67
Hbb-b1P02088 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hbb-b1P02088 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.87□□□□□ -0.67
Hbb-b1P02088 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hbb-b1P02088 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hbb-b1P02088 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms