Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.64■□□□□ 0.73
Tnnt1O88346 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.64■□□□□ 0.73
Tnnt1O88346 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.64■□□□□ 0.73
Tnnt1O88346 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.64■□□□□ 0.73
Tnnt1O88346 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Tnnt1O88346 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Tnnt1O88346 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.64■□□□□ 0.73
Tnnt1O88346 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.64■□□□□ 0.73
Tnnt1O88346 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.64■□□□□ 0.73
Tnnt1O88346 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.64■□□□□ 0.73
Tnnt1O88346 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnnt1O88346 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tnnt1O88346 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Tnnt1O88346 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Tnnt1O88346 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.63■□□□□ 0.73
Tnnt1O88346 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.63■□□□□ 0.73
Tnnt1O88346 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Tnnt1O88346 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Tnnt1O88346 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.63■□□□□ 0.73
Tnnt1O88346 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tnnt1O88346 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.63■□□□□ 0.73
Tnnt1O88346 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.62■□□□□ 0.73
Tnnt1O88346 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Tnnt1O88346 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.62■□□□□ 0.73
Tnnt1O88346 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Tnnt1O88346 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Tnnt1O88346 Gm10499-201ENSMUST00000174094 934 ntBASIC19.62■□□□□ 0.73
Tnnt1O88346 Gm8318-201ENSMUST00000182954 872 ntBASIC19.62■□□□□ 0.73
Tnnt1O88346 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Tnnt1O88346 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Tnnt1O88346 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.62■□□□□ 0.73
Tnnt1O88346 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnnt1O88346 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tnnt1O88346 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.61■□□□□ 0.73
Tnnt1O88346 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tnnt1O88346 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.61■□□□□ 0.73
Tnnt1O88346 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.61■□□□□ 0.73
Tnnt1O88346 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.61■□□□□ 0.73
Tnnt1O88346 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.61■□□□□ 0.73
Tnnt1O88346 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.61■□□□□ 0.73
Tnnt1O88346 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tnnt1O88346 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnnt1O88346 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tnnt1O88346 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.6■□□□□ 0.73
Tnnt1O88346 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnnt1O88346 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Tnnt1O88346 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms