Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dkk1O54908 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Dkk1O54908 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Dkk1O54908 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Gm45263-201ENSMUST00000210377 1375 ntBASIC13.72□□□□□ -0.21
Dkk1O54908 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Dkk1O54908 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
Dkk1O54908 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Dkk1O54908 Gm11485-201ENSMUST00000120048 1175 ntBASIC13.72□□□□□ -0.21
Dkk1O54908 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
Dkk1O54908 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC13.72□□□□□ -0.21
Dkk1O54908 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.72□□□□□ -0.21
Dkk1O54908 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Dkk1O54908 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Dkk1O54908 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Dkk1O54908 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Dkk1O54908 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.71□□□□□ -0.21
Dkk1O54908 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC13.71□□□□□ -0.21
Dkk1O54908 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.71□□□□□ -0.21
Dkk1O54908 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC13.71□□□□□ -0.21
Dkk1O54908 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC13.71□□□□□ -0.21
Dkk1O54908 Gm18748-201ENSMUST00000198507 622 ntBASIC13.71□□□□□ -0.21
Dkk1O54908 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.71□□□□□ -0.21
Dkk1O54908 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC13.71□□□□□ -0.21
Dkk1O54908 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Dkk1O54908 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.71□□□□□ -0.21
Dkk1O54908 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Dkk1O54908 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dkk1O54908 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dkk1O54908 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dkk1O54908 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.71□□□□□ -0.22
Dkk1O54908 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.71□□□□□ -0.22
Dkk1O54908 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dkk1O54908 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dkk1O54908 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Dkk1O54908 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.7□□□□□ -0.22
Dkk1O54908 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.7□□□□□ -0.22
Dkk1O54908 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Dkk1O54908 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.7□□□□□ -0.22
Dkk1O54908 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.7□□□□□ -0.22
Dkk1O54908 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Gm15403-201ENSMUST00000119343 1227 ntBASIC13.7□□□□□ -0.22
Dkk1O54908 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.7□□□□□ -0.22
Dkk1O54908 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.7□□□□□ -0.22
Dkk1O54908 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.7□□□□□ -0.22
Dkk1O54908 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.7□□□□□ -0.22
Dkk1O54908 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Dkk1O54908 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Dkk1O54908 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC13.7□□□□□ -0.22
Dkk1O54908 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.7□□□□□ -0.22
Dkk1O54908 AC132384.6-201ENSMUST00000218976 1206 ntBASIC13.7□□□□□ -0.22
Dkk1O54908 A1cf-203ENSMUST00000224400 1204 ntBASIC13.7□□□□□ -0.22
Dkk1O54908 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Dkk1O54908 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Dkk1O54908 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.7□□□□□ -0.22
Dkk1O54908 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Dkk1O54908 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dkk1O54908 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.69□□□□□ -0.22
Dkk1O54908 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Dkk1O54908 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.69□□□□□ -0.22
Dkk1O54908 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms