Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Matn3O35701 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Matn3O35701 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Matn3O35701 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Matn3O35701 Gm10231-201ENSMUST00000181584 441 ntBASIC14.02□□□□□ -0.17
Matn3O35701 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.02□□□□□ -0.17
Matn3O35701 Gm10175-202ENSMUST00000208752 441 ntBASIC14.02□□□□□ -0.17
Matn3O35701 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.02□□□□□ -0.17
Matn3O35701 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.02□□□□□ -0.17
Matn3O35701 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.02□□□□□ -0.17
Matn3O35701 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.02□□□□□ -0.17
Matn3O35701 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Matn3O35701 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.01□□□□□ -0.17
Matn3O35701 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.01□□□□□ -0.17
Matn3O35701 Gm29707-201ENSMUST00000196325 491 ntBASIC14.01□□□□□ -0.17
Matn3O35701 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Gm30025-201ENSMUST00000218555 728 ntBASIC14.01□□□□□ -0.17
Matn3O35701 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.01□□□□□ -0.17
Matn3O35701 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Matn3O35701 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Matn3O35701 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Matn3O35701 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14□□□□□ -0.17
Matn3O35701 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14□□□□□ -0.17
Matn3O35701 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14□□□□□ -0.17
Matn3O35701 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Matn3O35701 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms