Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Efnb3O35393 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Efnb3O35393 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Efnb3O35393 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Efnb3O35393 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.2□□□□□ -0.46
Efnb3O35393 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb3O35393 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Efnb3O35393 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.19□□□□□ -0.46
Efnb3O35393 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.19□□□□□ -0.46
Efnb3O35393 Gm22697-201ENSMUST00000175194 63 ntBASIC12.19□□□□□ -0.46
Efnb3O35393 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.19□□□□□ -0.46
Efnb3O35393 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.19□□□□□ -0.46
Efnb3O35393 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Efnb3O35393 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Efnb3O35393 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb3O35393 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.19□□□□□ -0.46
Efnb3O35393 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.18□□□□□ -0.46
Efnb3O35393 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Efnb3O35393 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Efnb3O35393 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Efnb3O35393 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.18□□□□□ -0.46
Efnb3O35393 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Efnb3O35393 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Efnb3O35393 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.18□□□□□ -0.46
Efnb3O35393 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Efnb3O35393 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.18□□□□□ -0.46
Efnb3O35393 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.18□□□□□ -0.46
Efnb3O35393 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Efnb3O35393 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb3O35393 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Efnb3O35393 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.17□□□□□ -0.46
Efnb3O35393 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.17□□□□□ -0.46
Efnb3O35393 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Efnb3O35393 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Efnb3O35393 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Efnb3O35393 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Efnb3O35393 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms