Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Mir5122-201ENSMUST00000175004 89 ntBASIC12.03□□□□□ -0.48
Tnfsf11O35235 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf11O35235 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.02□□□□□ -0.48
Tnfsf11O35235 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Tnfsf11O35235 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf11O35235 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Tnfsf11O35235 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf11O35235 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf11O35235 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf11O35235 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.02□□□□□ -0.48
Tnfsf11O35235 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf11O35235 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Gm13474-201ENSMUST00000122466 815 ntBASIC12.02□□□□□ -0.49
Tnfsf11O35235 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Gm10812-201ENSMUST00000099864 546 ntBASIC12.02□□□□□ -0.49
Tnfsf11O35235 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf11O35235 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.01□□□□□ -0.49
Tnfsf11O35235 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.01□□□□□ -0.49
Tnfsf11O35235 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.01□□□□□ -0.49
Tnfsf11O35235 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf11O35235 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms