Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gfra3O35118 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.32□□□□□ -0.28
Gfra3O35118 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.31□□□□□ -0.28
Gfra3O35118 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gfra3O35118 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Gfra3O35118 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gfra3O35118 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Gm18489-201ENSMUST00000172565 551 ntBASIC13.31□□□□□ -0.28
Gfra3O35118 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.31□□□□□ -0.28
Gfra3O35118 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.31□□□□□ -0.28
Gfra3O35118 Gm7787-201ENSMUST00000216858 688 ntBASIC13.31□□□□□ -0.28
Gfra3O35118 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Gm18515-201ENSMUST00000219755 797 ntBASIC13.31□□□□□ -0.28
Gfra3O35118 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.31□□□□□ -0.28
Gfra3O35118 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Gfra3O35118 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.31□□□□□ -0.28
Gfra3O35118 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gfra3O35118 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gfra3O35118 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gfra3O35118 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.3□□□□□ -0.28
Gfra3O35118 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.3□□□□□ -0.28
Gfra3O35118 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.3□□□□□ -0.28
Gfra3O35118 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Gfra3O35118 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.3□□□□□ -0.28
Gfra3O35118 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.3□□□□□ -0.28
Gfra3O35118 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.3□□□□□ -0.28
Gfra3O35118 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gfra3O35118 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.3□□□□□ -0.28
Gfra3O35118 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.3□□□□□ -0.28
Gfra3O35118 Thoc7-209ENSMUST00000225325 765 ntBASIC13.3□□□□□ -0.28
Gfra3O35118 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Gfra3O35118 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.3□□□□□ -0.28
Gfra3O35118 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.3□□□□□ -0.28
Gfra3O35118 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Gfra3O35118 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Gfra3O35118 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.3□□□□□ -0.28
Gfra3O35118 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gfra3O35118 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gfra3O35118 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gfra3O35118 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gfra3O35118 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gfra3O35118 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gfra3O35118 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Gfra3O35118 Gm15467-201ENSMUST00000120582 445 ntBASIC13.29□□□□□ -0.28
Gfra3O35118 Gm9727-201ENSMUST00000161387 555 ntBASIC13.29□□□□□ -0.28
Gfra3O35118 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms