Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trove2O08848 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trove2O08848 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trove2O08848 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trove2O08848 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trove2O08848 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Trove2O08848 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trove2O08848 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trove2O08848 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trove2O08848 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trove2O08848 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trove2O08848 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.83■□□□□ 0.13
Trove2O08848 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trove2O08848 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trove2O08848 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trove2O08848 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trove2O08848 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trove2O08848 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.83■□□□□ 0.12
Trove2O08848 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trove2O08848 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.83■□□□□ 0.12
Trove2O08848 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trove2O08848 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.83■□□□□ 0.12
Trove2O08848 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.83■□□□□ 0.12
Trove2O08848 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trove2O08848 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trove2O08848 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trove2O08848 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trove2O08848 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trove2O08848 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trove2O08848 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trove2O08848 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.83■□□□□ 0.12
Trove2O08848 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.82■□□□□ 0.12
Trove2O08848 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.82■□□□□ 0.12
Trove2O08848 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Trove2O08848 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Gm36967-201ENSMUST00000193814 266 ntBASIC15.82■□□□□ 0.12
Trove2O08848 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trove2O08848 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Trove2O08848 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.82■□□□□ 0.12
Trove2O08848 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.82■□□□□ 0.12
Trove2O08848 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
Trove2O08848 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.82■□□□□ 0.12
Trove2O08848 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trove2O08848 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trove2O08848 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.81■□□□□ 0.12
Trove2O08848 Gm13836-201ENSMUST00000121159 501 ntBASIC15.81■□□□□ 0.12
Trove2O08848 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Gm9013-201ENSMUST00000132939 882 ntBASIC15.81■□□□□ 0.12
Trove2O08848 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.81■□□□□ 0.12
Trove2O08848 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.81■□□□□ 0.12
Trove2O08848 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.81■□□□□ 0.12
Trove2O08848 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.81■□□□□ 0.12
Trove2O08848 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trove2O08848 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trove2O08848 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.8■□□□□ 0.12
Trove2O08848 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trove2O08848 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms