Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ercc2O08811 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.74■□□□□ 0.11
Ercc2O08811 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.74■□□□□ 0.11
Ercc2O08811 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
Ercc2O08811 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ercc2O08811 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ercc2O08811 BC037039-201ENSMUST00000192003 2205 ntBASIC15.74■□□□□ 0.11
Ercc2O08811 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Ercc2O08811 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.73■□□□□ 0.11
Ercc2O08811 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ercc2O08811 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Ercc2O08811 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ercc2O08811 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Ercc2O08811 Gm37153-201ENSMUST00000193637 231 ntBASIC15.73■□□□□ 0.11
Ercc2O08811 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.73■□□□□ 0.11
Ercc2O08811 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.73■□□□□ 0.11
Ercc2O08811 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.73■□□□□ 0.11
Ercc2O08811 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ercc2O08811 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.72■□□□□ 0.11
Ercc2O08811 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ercc2O08811 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ercc2O08811 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.72■□□□□ 0.11
Ercc2O08811 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.72■□□□□ 0.11
Ercc2O08811 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.72■□□□□ 0.11
Ercc2O08811 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.72■□□□□ 0.11
Ercc2O08811 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Ercc2O08811 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.72■□□□□ 0.11
Ercc2O08811 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.72■□□□□ 0.11
Ercc2O08811 Gm7461-201ENSMUST00000058918 827 ntBASIC15.72■□□□□ 0.11
Ercc2O08811 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.72■□□□□ 0.11
Ercc2O08811 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.72■□□□□ 0.11
Ercc2O08811 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ercc2O08811 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.72■□□□□ 0.11
Ercc2O08811 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Sybu-209ENSMUST00000228639 4113 ntBASIC15.71■□□□□ 0.11
Ercc2O08811 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ercc2O08811 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ercc2O08811 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.71■□□□□ 0.11
Ercc2O08811 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.71■□□□□ 0.11
Ercc2O08811 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ercc2O08811 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ercc2O08811 Gm18489-201ENSMUST00000172565 551 ntBASIC15.71■□□□□ 0.11
Ercc2O08811 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms