Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
AlyrefO08583 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.55■□□□□ 0.08
AlyrefO08583 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Gm13453-201ENSMUST00000118708 357 ntBASIC15.55■□□□□ 0.08
AlyrefO08583 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Gm38294-201ENSMUST00000192831 381 ntBASIC15.55■□□□□ 0.08
AlyrefO08583 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.55■□□□□ 0.08
AlyrefO08583 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.55■□□□□ 0.08
AlyrefO08583 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
AlyrefO08583 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AlyrefO08583 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.54■□□□□ 0.08
AlyrefO08583 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.54■□□□□ 0.08
AlyrefO08583 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.54■□□□□ 0.08
AlyrefO08583 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
AlyrefO08583 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.54■□□□□ 0.08
AlyrefO08583 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AlyrefO08583 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
AlyrefO08583 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.54■□□□□ 0.08
AlyrefO08583 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.54■□□□□ 0.08
AlyrefO08583 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AlyrefO08583 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AlyrefO08583 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
AlyrefO08583 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
AlyrefO08583 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
AlyrefO08583 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
AlyrefO08583 Gm45331-201ENSMUST00000209868 554 ntBASIC15.53■□□□□ 0.08
AlyrefO08583 Gm18622-201ENSMUST00000219361 595 ntBASIC15.53■□□□□ 0.08
AlyrefO08583 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
AlyrefO08583 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.53■□□□□ 0.08
AlyrefO08583 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
AlyrefO08583 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.53■□□□□ 0.08
AlyrefO08583 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AlyrefO08583 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
AlyrefO08583 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AlyrefO08583 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AlyrefO08583 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AlyrefO08583 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.52■□□□□ 0.08
AlyrefO08583 Gm12138-201ENSMUST00000122180 951 ntBASIC15.52■□□□□ 0.08
AlyrefO08583 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AlyrefO08583 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AlyrefO08583 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
AlyrefO08583 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AlyrefO08583 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.52■□□□□ 0.08
AlyrefO08583 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.52■□□□□ 0.08
AlyrefO08583 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.52■□□□□ 0.08
AlyrefO08583 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.52■□□□□ 0.08
AlyrefO08583 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AlyrefO08583 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AlyrefO08583 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AlyrefO08583 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AlyrefO08583 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.52■□□□□ 0.07
AlyrefO08583 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
AlyrefO08583 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
AlyrefO08583 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AlyrefO08583 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.51■□□□□ 0.07
AlyrefO08583 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Gm12859-201ENSMUST00000117834 427 ntBASIC15.51■□□□□ 0.07
AlyrefO08583 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
AlyrefO08583 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AlyrefO08583 Gm25406-201ENSMUST00000157599 105 ntBASIC15.51■□□□□ 0.07
AlyrefO08583 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms