Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-3J3QMG8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Rps4l-201ENSMUST00000071745 943 ntBASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-3J3QMG8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-3J3QMG8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Gm8318-201ENSMUST00000182954 872 ntBASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-3J3QMG8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Gm11452-201ENSMUST00000122376 690 ntBASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav13d-3J3QMG8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms