Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.82■□□□□ 0.12
Atf6F6VAN0 Gm10819-201ENSMUST00000099988 561 ntBASIC15.82■□□□□ 0.12
Atf6F6VAN0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Atf6F6VAN0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Atf6F6VAN0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.81■□□□□ 0.12
Atf6F6VAN0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.81■□□□□ 0.12
Atf6F6VAN0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Atf6F6VAN0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.8■□□□□ 0.12
Atf6F6VAN0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Atf6F6VAN0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.8■□□□□ 0.12
Atf6F6VAN0 Gm34391-201ENSMUST00000203706 907 ntBASIC15.8■□□□□ 0.12
Atf6F6VAN0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.8■□□□□ 0.12
Atf6F6VAN0 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.8■□□□□ 0.12
Atf6F6VAN0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Atf6F6VAN0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.79■□□□□ 0.12
Atf6F6VAN0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44357-201ENSMUST00000195897 142 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm19658-201ENSMUST00000196231 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44367-201ENSMUST00000196836 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44350-201ENSMUST00000197197 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44390-201ENSMUST00000197533 144 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44313-201ENSMUST00000198018 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44486-201ENSMUST00000198508 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44314-201ENSMUST00000199263 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44394-201ENSMUST00000199558 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44484-201ENSMUST00000199873 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm43347-201ENSMUST00000200226 580 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44466-201ENSMUST00000200264 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm44359-201ENSMUST00000200671 138 ntBASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atf6F6VAN0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms