Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.47■□□□□ 0.23
Sh2d4bA6X942 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh2d4bA6X942 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.46■□□□□ 0.23
Sh2d4bA6X942 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh2d4bA6X942 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh2d4bA6X942 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh2d4bA6X942 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Sh2d4bA6X942 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Sh2d4bA6X942 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Sh2d4bA6X942 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Sh2d4bA6X942 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sh2d4bA6X942 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Gm27646-201ENSMUST00000183989 110 ntBASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh2d4bA6X942 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh2d4bA6X942 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms