Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.51□□□□□ -0.57
Col6a5A6H584 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Gm15782-201ENSMUST00000121073 445 ntBASIC11.51□□□□□ -0.57
Col6a5A6H584 Mir7070-201ENSMUST00000183657 86 ntBASIC11.51□□□□□ -0.57
Col6a5A6H584 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a5A6H584 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Gm5828-201ENSMUST00000071842 1860 ntBASIC11.5□□□□□ -0.57
Col6a5A6H584 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.5□□□□□ -0.57
Col6a5A6H584 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.5□□□□□ -0.57
Col6a5A6H584 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.5□□□□□ -0.57
Col6a5A6H584 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.5□□□□□ -0.57
Col6a5A6H584 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Col6a5A6H584 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.5□□□□□ -0.57
Col6a5A6H584 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.5□□□□□ -0.57
Col6a5A6H584 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.5□□□□□ -0.57
Col6a5A6H584 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col6a5A6H584 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col6a5A6H584 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Col6a5A6H584 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col6a5A6H584 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Col6a5A6H584 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.5□□□□□ -0.57
Col6a5A6H584 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a5A6H584 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.49□□□□□ -0.57
Col6a5A6H584 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.49□□□□□ -0.57
Col6a5A6H584 Rarb-207ENSMUST00000225921 2756 ntBASIC11.49□□□□□ -0.57
Col6a5A6H584 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.49□□□□□ -0.57
Col6a5A6H584 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col6a5A6H584 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Gm24543-201ENSMUST00000103867 82 ntBASIC11.48□□□□□ -0.57
Col6a5A6H584 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.48□□□□□ -0.57
Col6a5A6H584 Mir5132-201ENSMUST00000175166 71 ntBASIC11.48□□□□□ -0.57
Col6a5A6H584 Gm18753-201ENSMUST00000201000 566 ntBASIC11.48□□□□□ -0.57
Col6a5A6H584 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Col6a5A6H584 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col6a5A6H584 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms