Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm6244-201ENSMUST00000178732 841 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm3436-201ENSMUST00000179930 840 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm19164-201ENSMUST00000210667 640 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 Dupd1-202ENSMUST00000224735 548 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.39□□□□□ -0.43
Chd6A3KFM7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.39□□□□□ -0.43
Chd6A3KFM7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.38□□□□□ -0.43
Chd6A3KFM7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.38□□□□□ -0.43
Chd6A3KFM7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Gm43138-201ENSMUST00000199123 708 ntBASIC12.38□□□□□ -0.43
Chd6A3KFM7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Gm27341-201ENSMUST00000183570 106 ntBASIC12.38□□□□□ -0.43
Chd6A3KFM7 Gm27501-201ENSMUST00000183599 107 ntBASIC12.38□□□□□ -0.43
Chd6A3KFM7 Gm27701-201ENSMUST00000184498 110 ntBASIC12.38□□□□□ -0.43
Chd6A3KFM7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chd6A3KFM7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Gm5566-201ENSMUST00000116118 459 ntBASIC12.37□□□□□ -0.43
Chd6A3KFM7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Gm17794-201ENSMUST00000220252 955 ntBASIC12.37□□□□□ -0.43
Chd6A3KFM7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.37□□□□□ -0.43
Chd6A3KFM7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.37□□□□□ -0.43
Chd6A3KFM7 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.37□□□□□ -0.43
Chd6A3KFM7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.37□□□□□ -0.43
Chd6A3KFM7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chd6A3KFM7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chd6A3KFM7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms