Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Gm19164-201ENSMUST00000210667 640 ntBASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav12-1A0N8R1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Efs-202ENSMUST00000227037 2540 ntBASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav12-1A0N8R1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav12-1A0N8R1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12-1A0N8R1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12-1A0N8R1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Trav12-1A0N8R1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12-1A0N8R1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav12-1A0N8R1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.83□□□□□ -0.36
Trav12-1A0N8R1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms