Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ighv1-47A0A0A6YY41 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm9172-201ENSMUST00000212092 954 ntBASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ighv1-47A0A0A6YY41 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm15165-201ENSMUST00000118140 502 ntBASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm15372-201ENSMUST00000120729 834 ntBASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm12134-201ENSMUST00000122109 520 ntBASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.71□□□□□ -0.37
Ighv1-47A0A0A6YY41 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv1-47A0A0A6YY41 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv1-47A0A0A6YY41 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv1-47A0A0A6YY41 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ighv1-47A0A0A6YY41 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv1-47A0A0A6YY41 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv1-47A0A0A6YY41 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ighv1-47A0A0A6YY41 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Ighv1-47A0A0A6YY41 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ighv1-47A0A0A6YY41 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms