Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm6089-201ENSMUST00000197666 938 ntBASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm10060-201ENSMUST00000212002 111 ntBASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbc1A0A0A6YWV4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbc1A0A0A6YWV4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm19164-201ENSMUST00000210667 640 ntBASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbc1A0A0A6YWV4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.13□□□□□ -0.15
Trbc1A0A0A6YWV4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms