Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.64□□□□□ -0.39
Trav18A0A075B656 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav18A0A075B656 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Olfr129-201ENSMUST00000122318 993 ntBASIC12.63□□□□□ -0.39
Trav18A0A075B656 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Gm6659-201ENSMUST00000174752 547 ntBASIC12.63□□□□□ -0.39
Trav18A0A075B656 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.63□□□□□ -0.39
Trav18A0A075B656 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.63□□□□□ -0.39
Trav18A0A075B656 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav18A0A075B656 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Rprl3-201ENSMUST00000157400 290 ntBASIC12.62□□□□□ -0.39
Trav18A0A075B656 Mir3081-201ENSMUST00000175305 84 ntBASIC12.62□□□□□ -0.39
Trav18A0A075B656 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Mir7071-201ENSMUST00000184847 69 ntBASIC12.62□□□□□ -0.39
Trav18A0A075B656 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav18A0A075B656 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav18A0A075B656 Grk6-207ENSMUST00000225925 2769 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms