Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav17A0A075B655 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.24□□□□□ -0.45
Trav17A0A075B655 Gm7889-201ENSMUST00000185591 958 ntBASIC12.24□□□□□ -0.45
Trav17A0A075B655 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.24□□□□□ -0.45
Trav17A0A075B655 Gm21559-201ENSMUST00000220638 855 ntBASIC12.24□□□□□ -0.45
Trav17A0A075B655 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Gm9987-201ENSMUST00000069768 567 ntBASIC12.24□□□□□ -0.45
Trav17A0A075B655 Gm8587-201ENSMUST00000076538 843 ntBASIC12.24□□□□□ -0.45
Trav17A0A075B655 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav17A0A075B655 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Gm11355-201ENSMUST00000121120 306 ntBASIC12.23□□□□□ -0.45
Trav17A0A075B655 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav17A0A075B655 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.23□□□□□ -0.45
Trav17A0A075B655 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.22□□□□□ -0.45
Trav17A0A075B655 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.22□□□□□ -0.45
Trav17A0A075B655 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.22□□□□□ -0.45
Trav17A0A075B655 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav17A0A075B655 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms