Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Gm45203-201ENSMUST00000206384 1831 ntBASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Gm15847-201ENSMUST00000121417 1065 ntBASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Gm27000-201ENSMUST00000182943 842 ntBASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Mtag2-201ENSMUST00000058665 714 ntBASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav3-4A0A075B654 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav3-4A0A075B654 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav3-4A0A075B654 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-4A0A075B654 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trav3-4A0A075B654 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-4A0A075B654 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Trav3-4A0A075B654 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav3-4A0A075B654 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 AC159205.3-201ENSMUST00000224614 874 ntBASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-4A0A075B654 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Gm24841-201ENSMUST00000158676 357 ntBASIC10.38□□□□□ -0.75
Trav3-4A0A075B654 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms