Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.93□□□□□ -0.5
Trav16A0A075B653 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16A0A075B653 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Gm2274-201ENSMUST00000184539 609 ntBASIC11.92□□□□□ -0.5
Trav16A0A075B653 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16A0A075B653 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC11.91□□□□□ -0.5
Trav16A0A075B653 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.91□□□□□ -0.5
Trav16A0A075B653 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Gm13168-201ENSMUST00000121771 632 ntBASIC11.91□□□□□ -0.5
Trav16A0A075B653 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.91□□□□□ -0.5
Trav16A0A075B653 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.91□□□□□ -0.5
Trav16A0A075B653 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Gm10566-201ENSMUST00000086739 996 ntBASIC11.91□□□□□ -0.5
Trav16A0A075B653 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav16A0A075B653 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav16A0A075B653 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.9□□□□□ -0.5
Trav16A0A075B653 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav16A0A075B653 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms