Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm22697-201ENSMUST00000175194 63 ntBASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.58□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.58□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Trav15-2-dv6-2A0A075B650 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.58□□□□□ -0.4
Trav15-2-dv6-2A0A075B650 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms