Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Mir6982-201ENSMUST00000184354 68 ntBASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Gm44430-201ENSMUST00000203376 995 ntBASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav7-6A0A075B640 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Gm38327-201ENSMUST00000195852 1755 ntBASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav7-6A0A075B640 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav7-6A0A075B640 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms