Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8n-2A0A075B633 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8n-2A0A075B633 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Trav8n-2A0A075B633 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8n-2A0A075B633 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8n-2A0A075B633 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8n-2A0A075B633 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav8n-2A0A075B633 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.08□□□□□ -0.16
Trav8n-2A0A075B633 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Gm18737-201ENSMUST00000173594 937 ntBASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav8n-2A0A075B633 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav8n-2A0A075B633 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Gm11543-201ENSMUST00000120758 370 ntBASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Mir6977-201ENSMUST00000184960 64 ntBASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav8n-2A0A075B633 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.04□□□□□ -0.16
Trav8n-2A0A075B633 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms