Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Mir770-201ENSMUST00000103252 94 ntBASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav15d-1-dv6d-1A0A075B624 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms