Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav4n-4A0A075B615 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Gm37292-201ENSMUST00000192062 758 ntBASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Gm2559-201ENSMUST00000201323 363 ntBASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav4n-4A0A075B615 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Gm23547-201ENSMUST00000158210 271 ntBASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 AC099934.2-201ENSMUST00000196389 70 ntBASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 AC156953.1-201ENSMUST00000196953 70 ntBASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 AC157822.2-201ENSMUST00000200291 70 ntBASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms