Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav5-1A0A075B5Z7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-1A0A075B5Z7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Mir3113-201ENSMUST00000175478 76 ntBASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-1A0A075B5Z7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm14494-201ENSMUST00000118786 435 ntBASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm10499-201ENSMUST00000174094 934 ntBASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm37935-201ENSMUST00000192012 982 ntBASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm18246-201ENSMUST00000221023 728 ntBASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav5-1A0A075B5Z7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.18□□□□□ -0.3
Trav5-1A0A075B5Z7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms