Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5538W4VSP6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Gm5538W4VSP6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm5538W4VSP6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Gm8318-201ENSMUST00000182954 872 ntBASIC15.72■□□□□ 0.11
Gm5538W4VSP6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm5538W4VSP6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Gm7230-201ENSMUST00000173026 815 ntBASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Gm27741-201ENSMUST00000185060 237 ntBASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm5538W4VSP6 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.71■□□□□ 0.1
Gm5538W4VSP6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.71■□□□□ 0.1
Gm5538W4VSP6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Gm5538W4VSP6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Gm5538W4VSP6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.71■□□□□ 0.1
Gm5538W4VSP6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm5538W4VSP6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm5538W4VSP6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm5538W4VSP6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.7■□□□□ 0.1
Gm5538W4VSP6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Gm6550-201ENSMUST00000187574 993 ntBASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Gm28659-201ENSMUST00000188013 759 ntBASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Gm10060-201ENSMUST00000212002 111 ntBASIC15.69■□□□□ 0.1
Gm5538W4VSP6 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Gm7461-201ENSMUST00000058918 827 ntBASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Gm5538W4VSP6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms