Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smarcb1Q9Z0H3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.94■□□□□ 0.14
Smarcb1Q9Z0H3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smarcb1Q9Z0H3 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smarcb1Q9Z0H3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.91■□□□□ 0.14
Smarcb1Q9Z0H3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms