Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Gm5643-201ENSMUST00000117081 966 ntBASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hmg20aQ9DC33 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Gm12085-201ENSMUST00000119263 940 ntBASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmg20aQ9DC33 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Gm15378-201ENSMUST00000121894 207 ntBASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmg20aQ9DC33 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hmg20aQ9DC33 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms