Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retreg3Q9CQV4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retreg3Q9CQV4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 BC037039-201ENSMUST00000192003 2205 ntBASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Asic1-205ENSMUST00000228185 1818 ntBASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retreg3Q9CQV4 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Gm15173-201ENSMUST00000122049 433 ntBASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Gm7230-201ENSMUST00000173026 815 ntBASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Mir5131-201ENSMUST00000175426 93 ntBASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retreg3Q9CQV4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Gm14722-201ENSMUST00000118943 689 ntBASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Gm12813-201ENSMUST00000119615 902 ntBASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retreg3Q9CQV4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms