Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Gm15678-201ENSMUST00000117573 960 ntBASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.54■□□□□ 0.08
Cdh23Q99PF4 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdh23Q99PF4 Mir3102-201ENSMUST00000175555 104 ntBASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cdh23Q99PF4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh23Q99PF4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh23Q99PF4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh23Q99PF4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.52■□□□□ 0.08
Cdh23Q99PF4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdh23Q99PF4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh23Q99PF4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdh23Q99PF4 Gm15198-201ENSMUST00000117283 177 ntBASIC15.52■□□□□ 0.07
Cdh23Q99PF4 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.52■□□□□ 0.07
Cdh23Q99PF4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh23Q99PF4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh23Q99PF4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh23Q99PF4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh23Q99PF4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdh23Q99PF4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cdh23Q99PF4 Gm5566-201ENSMUST00000116118 459 ntBASIC15.52■□□□□ 0.07
Cdh23Q99PF4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.52■□□□□ 0.07
Cdh23Q99PF4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.52■□□□□ 0.07
Cdh23Q99PF4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Gm13226-201ENSMUST00000117838 404 ntBASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cdh23Q99PF4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.5■□□□□ 0.07
Cdh23Q99PF4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdh23Q99PF4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Cdh23Q99PF4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.5■□□□□ 0.07
Cdh23Q99PF4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.5■□□□□ 0.07
Cdh23Q99PF4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdh23Q99PF4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cdh23Q99PF4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cdh23Q99PF4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms