Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn4Q99P72 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn4Q99P72 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rtn4Q99P72 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn4Q99P72 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn4Q99P72 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Gm12260-201ENSMUST00000122447 411 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Gm8000-201ENSMUST00000188378 592 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 Gm6089-201ENSMUST00000197666 938 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 Gm44953-201ENSMUST00000208745 1286 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 Gm9172-201ENSMUST00000212092 954 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.72■□□□□ 0.75
Rtn4Q99P72 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Rtn4Q99P72 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gm15968-201ENSMUST00000119342 1168 ntBASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gm11780-201ENSMUST00000136880 516 ntBASIC19.71■□□□□ 0.75
Rtn4Q99P72 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Ap1g1-206ENSMUST00000179104 1096 ntBASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gm29013-201ENSMUST00000187431 237 ntBASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gm6550-201ENSMUST00000187574 993 ntBASIC19.71■□□□□ 0.75
Rtn4Q99P72 AC154828.2-201ENSMUST00000220908 1070 ntBASIC19.71■□□□□ 0.75
Rtn4Q99P72 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4Q99P72 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.7■□□□□ 0.74
Rtn4Q99P72 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
Rtn4Q99P72 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4Q99P72 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4Q99P72 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms