Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf111Q99ML9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf111Q99ML9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Rprl3-201ENSMUST00000157400 290 ntBASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf111Q99ML9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.96□□□□□ -0.02
Rnf111Q99ML9 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Gm27357-201ENSMUST00000183754 135 ntBASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf111Q99ML9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms