Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcc1Q99LI2 Gm10175-201ENSMUST00000086013 645 ntBASIC15.23■□□□□ 0.03
Clcc1Q99LI2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.23■□□□□ 0.03
Clcc1Q99LI2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Clcc1Q99LI2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Clcc1Q99LI2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcc1Q99LI2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Clcc1Q99LI2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Gm9682-201ENSMUST00000197505 556 ntBASIC15.22■□□□□ 0.03
Clcc1Q99LI2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Clcc1Q99LI2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Clcc1Q99LI2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcc1Q99LI2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcc1Q99LI2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcc1Q99LI2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Clcc1Q99LI2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Clcc1Q99LI2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.2■□□□□ 0.02
Clcc1Q99LI2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Clcc1Q99LI2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms