Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Gm7488-201ENSMUST00000117148 684 ntBASIC18.95■□□□□ 0.62
RtcbQ99LF4 Gm13015-201ENSMUST00000118674 204 ntBASIC18.95■□□□□ 0.62
RtcbQ99LF4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.95■□□□□ 0.62
RtcbQ99LF4 Gm28630-201ENSMUST00000187806 498 ntBASIC18.95■□□□□ 0.62
RtcbQ99LF4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.95■□□□□ 0.62
RtcbQ99LF4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RtcbQ99LF4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.94■□□□□ 0.62
RtcbQ99LF4 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.94■□□□□ 0.62
RtcbQ99LF4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RtcbQ99LF4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RtcbQ99LF4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RtcbQ99LF4 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.93■□□□□ 0.62
RtcbQ99LF4 Gm9063-201ENSMUST00000223299 582 ntBASIC18.93■□□□□ 0.62
RtcbQ99LF4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RtcbQ99LF4 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.93■□□□□ 0.62
RtcbQ99LF4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Gm14127-201ENSMUST00000117906 678 ntBASIC18.92■□□□□ 0.62
RtcbQ99LF4 Gm14767-201ENSMUST00000121559 586 ntBASIC18.92■□□□□ 0.62
RtcbQ99LF4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.92■□□□□ 0.62
RtcbQ99LF4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RtcbQ99LF4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.92■□□□□ 0.62
RtcbQ99LF4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.92■□□□□ 0.62
RtcbQ99LF4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RtcbQ99LF4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Syt7-205ENSMUST00000224135 1557 ntBASIC18.91■□□□□ 0.62
RtcbQ99LF4 Gm14719-201ENSMUST00000121891 340 ntBASIC18.91■□□□□ 0.62
RtcbQ99LF4 Gm16215-201ENSMUST00000161990 637 ntBASIC18.91■□□□□ 0.62
RtcbQ99LF4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RtcbQ99LF4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms