Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Gm14722-201ENSMUST00000118943 689 ntBASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Thumpd1Q99J36 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Gm22240-201ENSMUST00000175225 82 ntBASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Gm37055-201ENSMUST00000191866 133 ntBASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thumpd1Q99J36 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thumpd1Q99J36 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thumpd1Q99J36 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms