Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Gm12134-201ENSMUST00000122109 520 ntBASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Gm5587-201ENSMUST00000206270 674 ntBASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Sybu-209ENSMUST00000228639 4113 ntBASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb3Q91XZ7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb3Q91XZ7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.46■□□□□ 0.06
Pcdhb3Q91XZ7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhb3Q91XZ7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Gm14859-201ENSMUST00000117752 357 ntBASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Gm26039-201ENSMUST00000158152 144 ntBASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhb3Q91XZ7 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms