Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Gm14057-201ENSMUST00000120631 482 ntBASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Gm18057-201ENSMUST00000208220 503 ntBASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb5Q91XZ5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb5Q91XZ5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb5Q91XZ5 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.08■□□□□ 0.49
Pcdhb5Q91XZ5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb5Q91XZ5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb5Q91XZ5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Pcdhb5Q91XZ5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
Pcdhb5Q91XZ5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb5Q91XZ5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb5Q91XZ5 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.08■□□□□ 0.49
Pcdhb5Q91XZ5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Gm25948-201ENSMUST00000175334 112 ntBASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb5Q91XZ5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb5Q91XZ5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms