Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gm8825-201ENSMUST00000182565 998 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gm4518-201ENSMUST00000182638 718 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga4Q91XY4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm8097-201ENSMUST00000117903 829 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44357-201ENSMUST00000195897 142 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm19658-201ENSMUST00000196231 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44367-201ENSMUST00000196836 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44350-201ENSMUST00000197197 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44390-201ENSMUST00000197533 144 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44313-201ENSMUST00000198018 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44486-201ENSMUST00000198508 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44314-201ENSMUST00000199263 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44394-201ENSMUST00000199558 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44484-201ENSMUST00000199873 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44466-201ENSMUST00000200264 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm44359-201ENSMUST00000200671 138 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga4Q91XY4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Gm6257-201ENSMUST00000163864 910 ntBASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Gm10060-201ENSMUST00000212002 111 ntBASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga4Q91XY4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Gm25990-201ENSMUST00000102440 86 ntBASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Gm44771-201ENSMUST00000206975 626 ntBASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga4Q91XY4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms