Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Gm20553-201ENSMUST00000204205 844 ntBASIC16.36■□□□□ 0.21
TraipQ8VIG6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TraipQ8VIG6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.36■□□□□ 0.21
TraipQ8VIG6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TraipQ8VIG6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Gm15920-201ENSMUST00000118998 402 ntBASIC16.35■□□□□ 0.21
TraipQ8VIG6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.35■□□□□ 0.21
TraipQ8VIG6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.35■□□□□ 0.21
TraipQ8VIG6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TraipQ8VIG6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.34■□□□□ 0.21
TraipQ8VIG6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.34■□□□□ 0.21
TraipQ8VIG6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.34■□□□□ 0.21
TraipQ8VIG6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.34■□□□□ 0.21
TraipQ8VIG6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.34■□□□□ 0.21
TraipQ8VIG6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Grk6-207ENSMUST00000225925 2769 ntBASIC16.34■□□□□ 0.21
TraipQ8VIG6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TraipQ8VIG6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TraipQ8VIG6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TraipQ8VIG6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TraipQ8VIG6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TraipQ8VIG6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TraipQ8VIG6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TraipQ8VIG6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.33■□□□□ 0.21
TraipQ8VIG6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TraipQ8VIG6 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms