Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ndc1Q8VCB1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Gm14494-201ENSMUST00000118786 435 ntBASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ndc1Q8VCB1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Gm15358-201ENSMUST00000119249 520 ntBASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Gm37153-201ENSMUST00000193637 231 ntBASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Gm45167-201ENSMUST00000208007 322 ntBASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ndc1Q8VCB1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Ndc1Q8VCB1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms