Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna3Q8R4G9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.02
Chrna3Q8R4G9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Dancr-204ENSMUST00000132389 2347 ntBASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Gm14140-201ENSMUST00000119999 995 ntBASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Gm18489-201ENSMUST00000172565 551 ntBASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Gm7787-201ENSMUST00000216858 688 ntBASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna3Q8R4G9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna3Q8R4G9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Gm9682-201ENSMUST00000197505 556 ntBASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chrna3Q8R4G9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chrna3Q8R4G9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms