Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Prob1-201ENSMUST00000097619 3021 ntBASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vopp1Q8R1C3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Vopp1Q8R1C3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vopp1Q8R1C3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Gm27920-201ENSMUST00000183953 96 ntBASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vopp1Q8R1C3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vopp1Q8R1C3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vopp1Q8R1C3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms