Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col23a1Q8K4G2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Gm9522-201ENSMUST00000182394 926 ntBASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 AY702102-202ENSMUST00000194651 1173 ntBASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col23a1Q8K4G2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col23a1Q8K4G2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Gm11918-201ENSMUST00000121660 179 ntBASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col23a1Q8K4G2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col23a1Q8K4G2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col23a1Q8K4G2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.52■□□□□ 0.55
Col23a1Q8K4G2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Col23a1Q8K4G2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col23a1Q8K4G2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col23a1Q8K4G2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col23a1Q8K4G2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col23a1Q8K4G2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col23a1Q8K4G2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col23a1Q8K4G2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col23a1Q8K4G2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms