Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
Cystm1Q8K353 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Gm43205-201ENSMUST00000198622 1968 ntBASIC9.72□□□□□ -0.85
Cystm1Q8K353 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Cystm1Q8K353 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Cystm1Q8K353 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Gm13401-201ENSMUST00000117074 291 ntBASIC9.71□□□□□ -0.86
Cystm1Q8K353 Gm7638-201ENSMUST00000121348 967 ntBASIC9.71□□□□□ -0.86
Cystm1Q8K353 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Gm25016-201ENSMUST00000158399 131 ntBASIC9.71□□□□□ -0.86
Cystm1Q8K353 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Gm5357-201ENSMUST00000212720 1924 ntBASIC9.71□□□□□ -0.86
Cystm1Q8K353 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cystm1Q8K353 Gm42829-201ENSMUST00000198417 2585 ntBASIC9.7□□□□□ -0.86
Cystm1Q8K353 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.7□□□□□ -0.86
Cystm1Q8K353 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC9.7□□□□□ -0.86
Cystm1Q8K353 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cystm1Q8K353 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cystm1Q8K353 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms