Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cchcr1Q8K2I2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Gm8655-201ENSMUST00000221159 852 ntBASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cchcr1Q8K2I2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cchcr1Q8K2I2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cchcr1Q8K2I2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms