Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab11fip3Q8CHD8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rab11fip3Q8CHD8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rab11fip3Q8CHD8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab11fip3Q8CHD8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab11fip3Q8CHD8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rab11fip3Q8CHD8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab11fip3Q8CHD8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rab11fip3Q8CHD8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab11fip3Q8CHD8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab11fip3Q8CHD8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Rab11fip3Q8CHD8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Gm16198-201ENSMUST00000118766 670 ntBASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab11fip3Q8CHD8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Gm8396-201ENSMUST00000057361 823 ntBASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rab11fip3Q8CHD8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms