Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Gm44430-201ENSMUST00000203376 995 ntBASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cabcoco1Q8CDT7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cabcoco1Q8CDT7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.15■□□□□ 0.02
Cabcoco1Q8CDT7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Mir6404-201ENSMUST00000183699 94 ntBASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cabcoco1Q8CDT7 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms